BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029H08LP1|AL429130
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1052 1802 0.0
>3x_Contig1052
Length = 4051
Score = 1802 bits (909), Expect = 0.0
Identities = 909/909 (100%)
Strand = Plus / Minus
Query: 1 atgtgggctccaacgatccatttttagaaaagcacttgaggcctcatttgcttcaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3021 atgtgggctccaacgatccatttttagaaaagcacttgaggcctcatttgcttcaagaag 2962
Query: 61 cagccaagggtactttttgggaagggaaaattgaagtaaactttgaagatggtttcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2961 cagccaagggtactttttgggaagggaaaattgaagtaaactttgaagatggtttcgatc 2902
Query: 121 attcttactacttcatatccacgtttgttcctcaacatgctgagttccatgctaagcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 attcttactacttcatatccacgtttgttcctcaacatgctgagttccatgctaagcatt 2842
Query: 181 tgggtttgatttgaatgcaaaagaatggttttaccaacaatttgcctggattgattcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841 tgggtttgatttgaatgcaaaagaatggttttaccaacaatttgcctggattgattcaat 2782
Query: 241 ttttctcaaatacattatacgttaacataattatgtaattatataattatgtataatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 ttttctcaaatacattatacgttaacataattatgtaattatataattatgtataatcat 2722
Query: 301 gccatttaaaattcgatgaagtgtcaataatgccctgacggtatatctgtcctttgtaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2721 gccatttaaaattcgatgaagtgtcaataatgccctgacggtatatctgtcctttgtaat 2662
Query: 361 caatcctttattatgattgcacctgattgccaaccacccgccgtgattgcaacgcatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2661 caatcctttattatgattgcacctgattgccaaccacccgccgtgattgcaacgcatgtt 2602
Query: 421 ccatctatgtcaacctttgtaggcctctggaccctaatgcttctcgctctttcaaaagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 ccatctatgtcaacctttgtaggcctctggaccctaatgcttctcgctctttcaaaagtt 2542
Query: 481 ccagctccacttgaaacaatagattccggttttccaagcccgagacatccacacatttcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 ccagctccacttgaaacaatagattccggttttccaagcccgagacatccacacatttcg 2482
Query: 541 ctttccaatccccatgtgtacatgtccccagtgtctgataacgcaattccatggtagtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 ctttccaatccccatgtgtacatgtccccagtgtctgataacgcaattccatggtagtca 2422
Query: 601 ccaaaagataaagagatgattttcacatttggtgtgatttcaatcttggttaaagtgtta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2421 ccaaaagataaagagatgattttcacatttggtgtgatttcaatcttggttaaagtgtta 2362
Query: 661 tgagcaacttcgctgtctttaatttccacggtatagcatgtatcacttgtgaatattgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 tgagcaacttcgctgtctttaatttccacggtatagcatgtatcacttgtgaatattgct 2302
Query: 721 aatgtgttattagacgcctgaacctttaccatttttccctcaataggtaaatctatgtac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 aatgtgttattagacgcctgaacctttaccatttttccctcaataggtaaatctatgtac 2242
Query: 781 ttctctatctcatttgagtatagccatagcttttcaccctcatttgtaatgtaaaagacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2241 ttctctatctcatttgagtatagccatagcttttcaccctcatttgtaatgtaaaagacg 2182
Query: 841 gcgttatcggatccgcacgcaaagtccactattttattggcgccattcacttctcctgta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2181 gcgttatcggatccgcacgcaaagtccactattttattggcgccattcacttctcctgta 2122
Query: 901 ttgggaatt 909
|||||||||
Sbjct: 2121 ttgggaatt 2113
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6619
Number of Sequences: 1807
Number of extensions: 6619
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)